# Purna

## Docs

- [Deep Research](https://docs.purna.ai/chat-experiences/deep-research.md): How MIP searches across 40+ databases and synthesizes evidence in real time.
- [Enzyme Design](https://docs.purna.ai/chat-experiences/enzyme-design.md): Design novel enzymes and ligand-binding proteins from a SMILES string — sequence, 3D structure, and automatic refolding validation.
- [Protein Embeddings & Mutation Likelihoods](https://docs.purna.ai/chat-experiences/protein-embeddings.md): Run ESM-2 and AbLang-2 on your protein or antibody sequences to produce embeddings and per-position mutation likelihoods — directly from the chat.
- [Protein Visualization](https://docs.purna.ai/chat-experiences/protein-visualization.md): View color-coded protein sequences, domains, features, and side-by-side comparisons.
- [Scientific Figures](https://docs.purna.ai/chat-experiences/scientific-figures.md): Generate publication-quality diagrams, infographics, pathways, and illustrations directly inside a chat.
- [Structure Prediction](https://docs.purna.ai/chat-experiences/structure-prediction.md): Predict and visualize 3D protein structures from amino acid sequences, and compare wildtype vs mutant conformations.
- [Code Execution](https://docs.purna.ai/code-execution/index.md): Run Python and R code on a private compute server attached to your chat session.
- [Key concepts](https://docs.purna.ai/concepts.md): Understand the core building blocks of Purna.
- [FAQ](https://docs.purna.ai/faq.md): Frequently asked questions about Purna.
- [ACMG classification](https://docs.purna.ai/guides/acmg.md): AI-enhanced ACMG/AMP variant classification with evidence review.
- [Case overview](https://docs.purna.ai/guides/case-overview.md): Dashboard view with charts, case information, and findings summary.
- [Case settings](https://docs.purna.ai/guides/case-settings.md): Configure case details, manage files, and view the audit log.
- [Cases](https://docs.purna.ai/guides/cases.md): Organize patient data, track findings, and manage variant workflows.
- [Chat](https://docs.purna.ai/guides/chat.md): Use natural language to search, analyze, and explore genomic data.
- [Clinical reports](https://docs.purna.ai/guides/clinical-reports.md): Generate structured clinical documentation from your analysis.
- [Consilium](https://docs.purna.ai/guides/consilium.md): Run structured multi-agent debates to stress-test scientific hypotheses with evidence-grounded reasoning.
- [Files](https://docs.purna.ai/guides/files.md): View, manage, and download all your uploaded and generated files in one place.
- [Findings](https://docs.purna.ai/guides/findings.md): Curate and manage variants of clinical interest.
- [Genomic database search](https://docs.purna.ai/guides/genomic-search.md): Query ClinVar, OMIM, PubMed, and other genomic databases from the chat.
- [Jobs](https://docs.purna.ai/guides/jobs.md): Run long-running computational pipelines autonomously in the background.
- [Gene panels](https://docs.purna.ai/guides/panels.md): Create and manage virtual gene panels for targeted variant filtering.
- [Phenotypes](https://docs.purna.ai/guides/phenotypes.md): Manage HPO phenotypes to inform variant interpretation.
- [Projects](https://docs.purna.ai/guides/projects.md): Organize chats, files, jobs, and research workflows with Projects.
- [Settings](https://docs.purna.ai/guides/settings.md): Configure your account, personalization, usage, and plan.
- [Team management](https://docs.purna.ai/guides/team.md): Manage your organization, invite members, and configure team settings.
- [Variant analysis](https://docs.purna.ai/guides/variant-analysis.md): Search, filter, and analyze genetic variants with AI-powered tools.
- [Variant detail](https://docs.purna.ai/guides/variant-detail.md): Deep-dive into individual variants across seven analysis tabs.
- [Visualizations](https://docs.purna.ai/guides/visualizations.md): Generate interactive charts from your genomic data directly in chat.
- [Purna AI - Molecular Intelligence Platform](https://docs.purna.ai/index.md): The intelligence layer for biological research.
- [Annotation Pipeline](https://docs.purna.ai/pipeline.md): How Purna processes VCF files — from upload to fully annotated, clinically interpretable variant data.
- [Platform](https://docs.purna.ai/platform.md): How MIP works — architecture, databases, reasoning, and compute."
- [Quickstart](https://docs.purna.ai/quickstart.md): Get started with Purna in minutes. Sign in, ask questions, and explore cases.
- [Usage](https://docs.purna.ai/usage.md): Understand how queries, tokens, storage, compute, cases, and other resources are metered on Purna.

## OpenAPI Specs

- [openapi](https://docs.purna.ai/api-reference/openapi.json)