# Purna

- [Purna AI](https://docs.purna.ai/index.md): An AI-native workspace for biological research.
- [Platform](https://docs.purna.ai/platform.md): Understand how Purna combines scientific reasoning, knowledge, compute, and research outputs.
- [Quickstart](https://docs.purna.ai/quickstart.md): Start a Purna session, add research context, and inspect the resulting work.
- [Key concepts](https://docs.purna.ai/concepts.md): Understand sessions, workflows, capabilities, compute, files, and research outputs in Purna.
- [Usage](https://docs.purna.ai/usage.md): Understand how queries, AI credits, compute, runtime, storage, and plan limits work in Purna.
- [Chat and sessions](https://docs.purna.ai/guides/chat.md): Ask questions, choose workflows, attach files, and continue research in a Purna session.
- [Projects](https://docs.purna.ai/guides/projects.md): Organize chats, files, jobs, and research workflows with Projects.
- [Files](https://docs.purna.ai/guides/files.md): View, manage, and download uploaded files and generated outputs.
- [Settings](https://docs.purna.ai/guides/settings.md): Configure your account, personalization, usage, and plan.
- [Team management](https://docs.purna.ai/guides/team.md): Manage your organization, invite members, and configure team settings.
- [Plan Mode](https://docs.purna.ai/chat-experiences/planning-mode.md): Clarify complex requests, approve an execution plan, and follow every step before reviewing the generated deliverables.
- [Deep Research](https://docs.purna.ai/chat-experiences/deep-research.md): Turn a research question into a transparent, evidence-backed, PRISMA-style literature review.
- [Bioinformatics](https://docs.purna.ai/chat-experiences/bioinformatics.md): Turn biological datasets into reproducible analyses, validated results, figures, and downloadable files.
- [Paper Writer](https://docs.purna.ai/guides/paper-writer.md): Create, refine, cite, and export scientific manuscripts in Purna.
- [AI Chat](https://docs.purna.ai/guides/paper-writer-ai-chat.md): Research, draft, and revise the current manuscript with document-aware AI.
- [AI Autocomplete](https://docs.purna.ai/guides/paper-writer-ai-autocomplete.md): Review and refine evidence-aware writing suggestions as you draft.
- [Jobs](https://docs.purna.ai/guides/jobs.md): Run long-running computational pipelines autonomously in the background.
- [Consilium](https://docs.purna.ai/guides/consilium.md): Run structured multi-agent debates to stress-test scientific hypotheses with evidence-grounded reasoning.
- [Database search](https://docs.purna.ai/guides/genomic-search.md): Query genomic, literature, pathway, protein, and drug databases from chat.
- [Code Execution](https://docs.purna.ai/code-execution/index.md): Run Python and R code on a private compute server attached to your chat session.
- [Visualizations](https://docs.purna.ai/guides/visualizations.md): Generate charts and scientific figures from data directly in chat.
- [Scientific Figures](https://docs.purna.ai/chat-experiences/scientific-figures.md): Generate publication-quality diagrams, infographics, pathways, and illustrations directly inside a chat.
- [Protein Visualization](https://docs.purna.ai/chat-experiences/protein-visualization.md): View color-coded protein sequences, domains, features, and side-by-side comparisons.
- [Structure Prediction](https://docs.purna.ai/chat-experiences/structure-prediction.md): Predict and visualize 3D protein structures from amino acid sequences, and compare wildtype vs mutant conformations.
- [Enzyme Design](https://docs.purna.ai/chat-experiences/enzyme-design.md): Design novel enzymes and ligand-binding proteins from a SMILES string — sequence, 3D structure, and automatic refolding validation.
- [Protein Embeddings & Mutation Likelihoods](https://docs.purna.ai/chat-experiences/protein-embeddings.md): Run ESM-2 and AbLang-2 on your protein or antibody sequences to produce embeddings and per-position mutation likelihoods — directly from the chat.
- [FAQ](https://docs.purna.ai/faq.md): Frequently asked questions about using Purna.


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